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1.
Lineage tracing reveals the phylodynamics, plasticity, and paths of tumor evolution.
Cell
; 185(11): 1905-1923.e25, 2022 05 26.
Article
in English
| MEDLINE | ID: mdl-35523183
2.
Single cell enhancer activity distinguishes GABAergic and cholinergic lineages in embryonic mouse basal ganglia.
Proc Natl Acad Sci U S A
; 119(15): e2108760119, 2022 04 12.
Article
in English
| MEDLINE | ID: mdl-35377797
3.
MULTI-seq: sample multiplexing for single-cell RNA sequencing using lipid-tagged indices.
Nat Methods
; 16(7): 619-626, 2019 07.
Article
in English
| MEDLINE | ID: mdl-31209384
4.
No detectable alloreactive transcriptional responses under standard sample preparation conditions during donor-multiplexed single-cell RNA sequencing of peripheral blood mononuclear cells.
BMC Biol
; 19(1): 10, 2021 01 20.
Article
in English
| MEDLINE | ID: mdl-33472616
5.
Cell population structure prior to bifurcation predicts efficiency of directed differentiation in human induced pluripotent cells.
Proc Natl Acad Sci U S A
; 114(9): 2271-2276, 2017 02 28.
Article
in English
| MEDLINE | ID: mdl-28167799
6.
Epithelial zonation along the mouse and human small intestine defines five discrete metabolic domains.
Nat Cell Biol
; 26(2): 250-262, 2024 Feb.
Article
in English
| MEDLINE | ID: mdl-38321203
7.
The temporal progression of immune remodeling during metastasis.
bioRxiv
; 2023 May 07.
Article
in English
| MEDLINE | ID: mdl-37205523
8.
D-SPIN constructs gene regulatory network models from multiplexed scRNA-seq data revealing organizing principles of cellular perturbation response.
bioRxiv
; 2023 May 20.
Article
in English
| MEDLINE | ID: mdl-37131803
9.
Patterning and folding of intestinal villi by active mesenchymal dewetting.
bioRxiv
; 2023 Aug 15.
Article
in English
| MEDLINE | ID: mdl-37425793
10.
Epithelial zonation along the mouse and human small intestine defines five discrete metabolic domains.
bioRxiv
; 2023 Sep 22.
Article
in English
| MEDLINE | ID: mdl-37790430
11.
Mapping hormone-regulated cell-cell interaction networks in the human breast at single-cell resolution.
Cell Syst
; 13(8): 644-664.e8, 2022 08 17.
Article
in English
| MEDLINE | ID: mdl-35863345
12.
AMULET: a novel read count-based method for effective multiplet detection from single nucleus ATAC-seq data.
Genome Biol
; 22(1): 252, 2021 09 01.
Article
in English
| MEDLINE | ID: mdl-34465366
13.
Human microglia states are conserved across experimental models and regulate neural stem cell responses in chimeric organoids.
Cell Stem Cell
; 28(12): 2153-2166.e6, 2021 12 02.
Article
in English
| MEDLINE | ID: mdl-34536354
14.
DoubletFinder: Doublet Detection in Single-Cell RNA Sequencing Data Using Artificial Nearest Neighbors.
Cell Syst
; 8(4): 329-337.e4, 2019 04 24.
Article
in English
| MEDLINE | ID: mdl-30954475
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